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| Status |
Public on Feb 03, 2023 |
| Title |
Chromatin landscape in perinatal cardiomyocytes |
| Organisms |
Mus musculus; Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
In order to understand the transcriptional regulatory program of cardiomyocytes perinatal transition, we mapped chromatin accessibility, transcription-centered long-range chromatin interactions as well as gene expression in cardiomyocyte undergoing perinatal transition.
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| Overall design |
Gene expression profiles, chromatin accessibility genome-wide maps and chromatin interactions were obtained through RNA-sequencing, ATAC-sequencing and HiChIP sequencing of samples obtained from late fetal and neonatal cardiomyocytes.
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| |
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| Contributor(s) |
Zhang J, Yang J, Ouyang Z |
| Citation(s) |
36653336 |
| |
| Submission date |
Jun 22, 2021 |
| Last update date |
Feb 04, 2023 |
| Contact name |
Zhang Jing |
| E-mail(s) |
DG20350040@smail.nju.edu.cn
|
| Phone |
18801595906
|
| Organization name |
Nanjing University
|
| Street address |
Nanjing University
|
| City |
Nanjing |
| ZIP/Postal code |
250000 |
| Country |
China |
| |
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| Platforms (2) |
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| Samples (28)
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| Relations |
| BioProject |
PRJNA739989 |
| SRA |
SRP325082 |
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