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Series GSE179419 Query DataSets for GSE179419
Status Public on Feb 17, 2022
Title Expression data from mouse lung epithelial cells during E. coli pneumonia in the presence or absence of LIF neutralization (6 h)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Leukemia inhibitory factor (LIF) is a cytoprotective cytokine that reduces lung injury during pneumonia. The purpose of this study was to determine the influence of LIF on pneumonia-induced gene changes in lung epithelium.
Mice received intratracheal instillations of vehicle (PBS) or Escherichia coli (10^6 CFU). Control IgG or anti-LIF specific IgG was included in the instillate. 6 hours after the challenge, lung epithelial cells (EpCAM+/CD45-) were sorted from enzymatic lung digests and used for RNA isolation and microarray analysis.
 
Overall design RNA from 3 separate groups of mice (3 mice per group) was analyzed: 1) 6h Vehicle/control IgG-treated; 2) 6h E. coli/control IgG-treated; and 3) 6h E. coli/anti-LIF-specific IgG.
 
Contributor(s) Na E, Traber K, Quinton L
Citation(s) 35137631
Submission date Jul 04, 2021
Last update date Jul 26, 2022
Contact name Boston University Microarray and Sequencing Resource
E-mail(s) msrdata@bu.edu
Organization name Boston University
Department Microarray and Sequencing Resource
Street address 72 East Concord Street, E631
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platforms (1)
GPL21783 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [CDF: mogene10st_Mm_ENTREZG_17.0.0]
Samples (9)
GSM5417436 PBS + Control IgG 6 h 1
GSM5417437 PBS + Control IgG 6 h 2
GSM5417438 PBS + Control IgG 6 h 3
This SubSeries is part of SuperSeries:
GSE179764 Epithelial LIF signaling limits apoptosis and lung injury during bacterial pneumonia
Relations
BioProject PRJNA743664

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179419_RAW.tar 56.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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