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Series GSE18008 Query DataSets for GSE18008
Status Public on Dec 11, 2009
Title Transcriptomic analysis of maize developing earshoot from tropical maize hybrid genotypes native to Nigeria
Organism Zea mays
Experiment type Expression profiling by array
Summary Tropical maize genotypes are well known for their traits of late flowering and higher biomass. Carbon/Nitrogen balance in these genotypes is significantly different from temperate genotypes. Microarray analysis of gene expression
changes occuring in developing earshoots was done and results were compared with the temperate genotype microarray analysis, previously conducted. A low yielding variety was used as a reference against three high yielding varities.

Keywords: Genotype response
 
Overall design Technical replicates, dye swaps, technical replicates of dye swaps, no biological replicates
 
Contributor(s) Moose S, Ayodeji A
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Submission date Sep 08, 2009
Last update date Sep 24, 2013
Contact name Stephen Patrick Moose
E-mail(s) smoose@illinois.edu
Phone 2172446146
Fax 2173339817
URL http://www.cropsci.illinois.edu/faculty/moose/
Organization name University of Illinois at Urbana-Champaign
Department Crop Sciences
Lab Corn Functional Genomics Laboratory
Street address 1201 W Gregory
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platforms (2)
GPL5439 Maize oligo array version 1.9 array A
GPL5440 Maize oligo array version 1.9 array B
Samples (24)
GSM450495 Reference vs Genotype1 rep1
GSM450496 Reference vs Genotype1 rep1 dye swap
GSM450497 Reference vs Genotype1 rep2
Relations
BioProject PRJNA119235

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18008_RAW.tar 105.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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