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Series GSE180503 Query DataSets for GSE180503
Status Public on Nov 07, 2022
Title Gas5 Pulldown Total and small RNAseq
Organism Mus musculus
Experiment type Other
Summary To identify RNAs interacting with lncRNA Gas5 in hippocampal neurons, we performed a Gas5 pulldown from mouse hippocampal cultures using a biotinylated Gas5 bait and performed total and small RNA sequencing
 
Overall design Gas5 Pulldown
 
Contributor(s) Grinman E, Puthanveettil S
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Submission date Jul 20, 2021
Last update date Nov 07, 2022
Contact name Sathyanarayanan V Puthanveettil
E-mail(s) sputhanv@scripps.edu
Phone 561-228-2243
Organization name Scripps Florida
Department Neuroscience
Lab Puthanveettil
Street address 130 Scripps Way
City Jupiter
State/province Florida
ZIP/Postal code 33458
Country USA
 
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM5464017 Antisense1 Total RNA
GSM5464018 Antisense2 Total RNA
GSM5464019 Antisense3 Total RNA
Relations
BioProject PRJNA748426
SRA SRP329157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180503_Gas5_TotalRNA_SensevsAntisense.csv.gz 1.4 Mb (ftp)(http) CSV
GSE180503_Gas5_miRNA_SensevsAntisense.csv.gz 10.8 Kb (ftp)(http) CSV
GSE180503_TotalRNA_counts.csv.gz 604.0 Kb (ftp)(http) CSV
GSE180503_miRNA_counts.csv.gz 1.2 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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