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| Status |
Public on Jul 29, 2021 |
| Title |
Genome-wide DNA demethylation of NB-1 (neuroblastoma cell line) after treatment of mock and 5-aza-2'-deoxycytidine (5-aza-dC) |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
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| Summary |
A neuroblasoma cell line, NB-1, was treated with a DNA demethylating agents (5-aza-2'-deoxycytidine: 5-aza-dC). Genome-wide DNA methylation was analyzed using the Infinium HumanMethylation450 BeadChip.
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| Overall design |
Bisulfite converted DNA from the 2 samples were hybridized to the Infinium HumanMethylation450 BeadChip
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| Contributor(s) |
Hattori N, Ushijima T |
| Citation(s) |
34635821 |
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| Submission date |
Jul 27, 2021 |
| Last update date |
Oct 28, 2021 |
| Contact name |
Naoko Hattori |
| E-mail(s) |
nhattori@ncc.go.jp
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| Phone |
+81-3-3542-2511
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| Organization name |
National Cancer Center
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| Department |
Research Institute
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| Lab |
Division of Epigenomics
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| Street address |
5-1-1 Tsukiji, Chuo-ku
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| City |
Tokyo |
| ZIP/Postal code |
104-0045 |
| Country |
Japan |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA750118 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE180929_RAW.tar |
199.1 Mb |
(http)(custom) |
TAR (of IDAT) |
| Processed data included within Sample table |
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