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Series GSE181383 Query DataSets for GSE181383
Status Public on Oct 05, 2021
Title Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analysis of CTCF wildtype in mouse embryonic posterior trunk and brain samples
 
Overall design ChIP-seq analysis of CTCF wildtype in mouse embryonic posterior trunk and brain samples
 
Contributor(s) Amândio AR, Beccari L, Lopez-Delisle L, Mascrez B, Zakany J, Gitto S, Duboule D
Citation(s) 34711654
Submission date Aug 03, 2021
Last update date Jan 25, 2022
Contact name Lucille Lopez-Delisle
E-mail(s) lucille.delisle@epfl.ch
Organization name EPFL
Street address Station 19
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM5501395 E10 posterior trunk ChIP CTCF
GSM5501396 E12 brain ChIP CTCF
GSM5501397 E12 DFL ChIP CTCF_re-analyzed
This SubSeries is part of SuperSeries:
GSE181387 Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster
Relations
BioProject PRJNA751992
SRA SRP331015

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181383_RAW.tar 3.2 Gb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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