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Series GSE181559 Query DataSets for GSE181559
Status Public on May 31, 2023
Title IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression [human RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Chromosome 17q gain is an independent prognostic marker in neuroblastoma, harboring several potential oncogenes including IGF2BP1 and BIRC5. IGF2BP1 was shown to be upregulated in unfavorable neuroblastoma and correlates with poor patient survival. Here, we report that overexpression of IGF2BP1 in a transgenic mouse model induces neuroblastoma with all characteristics known for human neuroblastoma, including MYCN upregulation and genomic aberrations. Furthermore, we demonstrate that genes located at chromosome 17q have an exceptionally high potential as therapeutic targets in addition to a combined inhibition of IGF2BP1 and BIRC5 resulting in additive effects.
 
Overall design RNA sequencing of primary neuroblastoma tumor samples.
Web link https://doi.org/10.1186/s12943-023-01792-0
 
Contributor(s) Hagemann S, Misiak D, Hüttelmaier S
Citation(s) 37246217
Submission date Aug 06, 2021
Last update date Jun 01, 2023
Contact name Danny Misiak
E-mail(s) danny.misiak@medizin.uni-halle.de
Phone +49345573962
Organization name Martin Luther University Halle-Wittenberg
Department Molecular Cell Biology
Lab Hüttelmaier Lab
Street address Kurt-Mothes-Str. 3a
City Halle (Saale)
ZIP/Postal code 06120
Country Germany
 
Platforms (1)
GPL15456 Illumina HiScanSQ (Homo sapiens)
Samples (97)
GSM5506066 JB_1 [RNA-seq]
GSM5506067 JB_2 [RNA-seq]
GSM5506068 JB_3 [RNA-seq]
This SubSeries is part of SuperSeries:
GSE181582 IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression
Relations
BioProject PRJNA752570
SRA SRP331340

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181559_DE_17_unbalanced_MNA_protein_coding.csv.gz 5.5 Mb (ftp)(http) CSV
GSE181559_DE_17_unbalanced_protein_coding.csv.gz 13.7 Mb (ftp)(http) CSV
GSE181559_DE_MNA_nMNA_protein_coding.csv.gz 13.7 Mb (ftp)(http) CSV
GSE181559_DE_s123_s4_protein_coding.csv.gz 11.3 Mb (ftp)(http) CSV
GSE181559_DE_s1_s4_protein_coding.csv.gz 8.1 Mb (ftp)(http) CSV
GSE181559_Neuroblastoma_tumor_totalRNA_TMM_FPKM.csv.gz 27.3 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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