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Series GSE181566 Query DataSets for GSE181566
Status Public on Sep 23, 2022
Title Circadian Clock-Controlled Translation of Specific mRNAs in Neurospora crassa Requires Rhythmic eIF2α Activity and P-body Sequestration
Organism Neurospora crassa
Experiment type Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s)
  • Castillo KD, Wu C, Ding Z, Lopez-Garcia OK et al. A circadian clock translational control mechanism targets specific mRNAs to cytoplasmic messenger ribonucleoprotein granules. Cell Rep 2022 Dec 27;41(13):111879. PMID: 36577368
  • Castillo KD, Chapa ED, Lamb TM, Gangopadhyay M et al. Circadian clock control of tRNA synthetases in Neurospora crassa. F1000Res 2022;11:1556. PMID: 37841830
Submission date Aug 06, 2021
Last update date Oct 26, 2023
Contact name Deborah Bell-Pedersen
E-mail(s) dpedersen@bio.tamu.edu
Organization name Texas A&M University
Department Biology
Street address 3258 TAMU
City College Station
State/province Texas
ZIP/Postal code 77840
Country USA
 
Platforms (2)
GPL20660 Illumina NextSeq 500 (Neurospora crassa)
GPL30082 Illumina HiSeq 3000 (Neurospora crassa)
Samples (160)
GSM5506185 RNA-Seq wild-type DD12 rep1
GSM5506186 RNA-Seq wild-type DD16 rep1
GSM5506187 RNA-Seq wild-type DD20 rep1
This SuperSeries is composed of the following SubSeries:
GSE181564 Circadian Clock-Controlled Translation of Specific mRNAs in Neurospora crassa Requires Rhythmic eIF2α Activity and P-body Sequestration [RNA-seq]
GSE181565 Circadian Clock-Controlled Translation of Specific mRNAs in Neurospora crassa Requires Rhythmic eIF2α Activity and P-body Sequestration [Ribo-seq]
Relations
BioProject PRJNA752571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181566_RAW.tar 25.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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