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Series GSE182153 Query DataSets for GSE182153
Status Public on Aug 16, 2021
Title A novel therapeutic strategy targeting the mesenchymal phenotype of malignant pleural mesothelioma by suppressing LSD1 [ATAC-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ATAC-seq analysis of following knock down of LSD1 in ACC-MESO-1 cells.
 
Overall design We performed ATAC-seq analysis in ACC-MESO-1 cell infected with shLSD1 or control.
 
Contributor(s) Tajima K, Wirawan A
Citation(s) 34593606
Submission date Aug 15, 2021
Last update date Nov 15, 2021
Contact name Ken Tajima
E-mail(s) tajiken@juntendo.ac.jp
Phone +81-3-5802-1063
Organization name Juntendo University
Department Department of Respiratory Medicine
Street address 2-1-1 Hongo
City Bunkyo-Ku
State/province Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM5519398 Control [1_0630]
GSM5519399 Control [2_0631]
GSM5519400 ShLSD1 [3_0632]
This SubSeries is part of SuperSeries:
GSE182154 A novel therapeutic strategy targeting the mesenchymal phenotype of malignant pleural mesothelioma by suppressing LSD1
Relations
BioProject PRJNA754805
SRA SRP332633

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182153_RAW.tar 412.3 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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