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Series GSE182164 Query DataSets for GSE182164
Status Public on Aug 19, 2021
Title RNA seq of the retina and optic nerve from goats 1 day after pre-chiasmatic optic nerve crush injury
Organism Capra hircus
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Transcriptomic changes in the pre-chiasmatic optic nerve, retrobulbar optic nerve and retina of goats 1 day after optic nerve crush injury
 
Overall design optic nerve and retinal mRNA profiles of injured and uninjured site
 
Contributor(s) Yu Z, Sun L, Zhang Y, Xia T, Lu S, Li M
Citation(s) 35352678
Submission date Aug 16, 2021
Last update date May 10, 2022
Contact name Yu Zhonghao
E-mail(s) yuzhonghao0101@gmail.com
Phone 19817563122
Organization name The Eye Hospital, School of Ophthalmology & Optometry
Street address 270 Xueyuan West Road
City Wenzhou City
State/province Zhejiang Province, China
ZIP/Postal code 325000
Country China
 
Platforms (1)
GPL27106 Illumina NovaSeq 6000 (Capra hircus)
Samples (24)
GSM5519664 goat optic nerve OS #1 1
GSM5519665 goat optic nerve OS #3 1
GSM5519666 goat optic nerve OD #1 1
Relations
BioProject PRJNA755202
SRA SRP332684

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182164_All_gene_counts.txt.gz 1.0 Mb (ftp)(http) TXT
GSE182164_All_gene_fpkm.txt.gz 2.3 Mb (ftp)(http) TXT
GSE182164_LncRNA.fa.gz 46.8 Mb (ftp)(http) FA
GSE182164_LncRNA_counts.txt.gz 1.3 Mb (ftp)(http) TXT
GSE182164_LncRNA_fpkm.txt.gz 3.4 Mb (ftp)(http) TXT
GSE182164_known_lncRNA.result.txt.gz 327.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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