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Series GSE182438 Query DataSets for GSE182438
Status Public on Mar 15, 2022
Title Re-establishment of spermatogenesis after more than 20 years of cryopreservation of rat spermatogonial stem cells reveals an important impact in differentiation capacity
Organism Rattus rattus
Experiment type Expression profiling by high throughput sequencing
Summary Treatment of cancer in children is increasingly successful but leaves many prepubertal boys suffering from infertility or subfertility later in life. A current strategy to preserve fertility in these boys is to cryopreserve a testicular biopsy prior to treatment with the expectation of future technologies allowing for the reintroduction of stem cells and restoration of spermatogenesis.
Spermatogonial stem cells form the basis of male reproduction, differentiating into all germ cell types, including mature spermatozoa and can regenerate spermatogenesis following transplantation into an infertile testis. Here we demonstrate for the first time that rat spermatogonial stem cells frozen for more than 20 years can be transplanted into recipient mice and produce all differentiating germ cell types.
However, compared with freshly-isolated cells or those frozen for a short period of time, long frozen cells do not colonize efficiently and showed reduced production of spermatids. Single cell RNA sequencing reveled similar profiles of gene expression changes between short and long frozen cells as compared with fresh immediately after thawing. Conversely, following transplantation, long frozen samples showed enhanced stem cell signaling in the undifferentiated spermatogonia compartment, consistent with self-renewal and a lack of differentiation.
In addition, long frozen samples showed fewer round spermatids with detectable protamine expression, suggesting a partial block of spermatogenesis after meiosis resulting in a lack of elongating spermatids. These findings strongly suggest that prolonged cryopreservation can impact the success of transplantation to produce spermatogenesis, which may not be revealed by analysis of the cells immediately after thawing.
 
Overall design Single-cell RNA analysis of 56 samples across three treatments. Freezing state, 3 levels - fresh, short frozen, long frozen. Transplantation status, 2 levels - untransplanted and transplanted. Selection, 2 levels - unselected and EpCAM+ cells. Each treatment contains 3-5 biological replicates.
 
Contributor(s) Whelan EC, Yang F, Avarbock MR, Sullivan MC, Beiting DC, Brinster RL
Citation(s) 35536782
Submission date Aug 19, 2021
Last update date Jul 10, 2024
Contact name Eoin Christopher Whelan
E-mail(s) ewhelan@vet.upenn.edu
Phone 2158988805
Organization name University of Pennsylvania School of Veterinary Medicine
Department Biomedical Sciences
Lab Sasaki
Street address 3800 Spruce St
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL28964 Illumina NextSeq 500 (Rattus rattus)
Samples (56)
GSM5529250 Fresh 5c
GSM5529251 Fresh 5d
GSM5529252 Fresh 6c
Relations
BioProject PRJNA756273
SRA SRP333339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182438_RAW.tar 441.0 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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