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Series GSE182767 Query DataSets for GSE182767
Status Public on Apr 12, 2022
Title Single cell RNAseq of Th17 and Th22 cells with Gpr65_WT versus KO
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary scRNAseq of in vitro polarized Th17 and Th22 cells (Gpr65_WT versus KO), to compare metabolism gene expression in Gpr65_WT versus KO.
 
Overall design scRNAseq of in vitro polarized Th17 and Th22 cells (Gpr65_WT versus KO, for Th17, 2WT_vs_2KO, for Th22, 2WT_vs_2KO), to compare differential gene expression in WT versus KO.
 
Contributor(s) Chen X, Jaiswal A, Graham D, Xavier R
Citation(s) 35668320
Submission date Aug 25, 2021
Last update date Jul 25, 2022
Contact name Alok Jaiswal
E-mail(s) ajaiswal@broadinstitute.org
Organization name The Broad Institute of MIT and Harvard
Street address 415 Main Street
City Cambridge
State/province MASSACHUSETTS
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM5536441 Gpr65_KO_Th17_1
GSM5536442 Gpr65_KO_Th17_2
GSM5536443 Gpr65_KO_Th22_1
Relations
BioProject PRJNA757733
SRA SRP334093

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182767_barcodes.tsv.gz 623.1 Kb (ftp)(http) TSV
GSE182767_genes.tsv.gz 103.5 Kb (ftp)(http) TSV
GSE182767_matrix.mtx.gz 349.5 Mb (ftp)(http) MTX
GSE182767_metadata.tsv.gz 3.3 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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