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| Status |
Public on Mar 18, 2010 |
| Title |
Genome-wide analysis of miRNA levels in colon cancer |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by array
|
| Summary |
Analysis of miRNA levels found in tissue obtained from proficient mismatch repair (pMMR) TNM stage 2|3|4 colon tumor, deficient MMR (dMMR) colon tumor, and normal colon.
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| |
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| Overall design |
miRNA levels obtained from macrodissected colon tumors with > 70% H&E staining were compared with normal colon tissue. Additional comparisons based on mismatch repair status identified by loss of hMLH1 protein and microsattelite instability assay and TNM stage were carried out. This submission provides access to the data discussed in our paper.
The supplementary file 'GSE18392_non-normalized_data.txt' file contains non-normalized data for Samples GSM458618-GSM458762.
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| |
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| Contributor(s) |
Sarver A |
| Citation(s) |
19922656 |
| |
| Submission date |
Oct 02, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Aaron Sarver |
| Organization name |
University of Minnesota
|
| Department |
Masonic Cancer Center
|
| Lab |
Biostatistics and Informatics
|
| Street address |
425 East River Road
|
| City |
Minneapolis |
| State/province |
MN |
| ZIP/Postal code |
55455 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL8178 |
Illumina Human v1 MicroRNA expression beadchip |
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| Samples (145)
|
|
| Relations |
| BioProject |
PRJNA118077 |
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