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Series GSE184213 Query DataSets for GSE184213
Status Public on Aug 05, 2023
Title Methylation studies in multiple human tissues N36
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Methylation profiling by array
Summary An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from human tissue samples.
n=96 tissues. Skin (n=72), keratinocyte (n=20), fibroblast (1), epidermis (2), dermis (1)
 
Overall design Genome annotations of the array can be downloaded from https://github.com/shorvath/MammalianMethylationConsortium
 
Contributor(s) Horvath S, Raj K
Citation(s)
  • Horvath S, Haghani A, Zoller JA, Lu AT et al. Pan-primate studies of age and sex. Geroscience 2023 Dec;45(6):3187-3209. PMID: 37493860
  • Lu AT, Fei Z, Haghani A, Robeck TR et al. Universal DNA methylation age across mammalian tissues. Nat Aging 2023 Sep;3(9):1144-1166. PMID: 37563227
  • Li CZ, Haghani A, Yan Q, Lu AT et al. Epigenetic predictors of species maximum life span and other life-history traits in mammals. Sci Adv 2024 Jun 7;10(23):eadm7273. PMID: 38848365
Submission date Sep 15, 2021
Last update date Jun 26, 2024
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platforms (1)
GPL28271 Illumina HorvathMammalianMethylChip40 BeadChip
Samples (96)
GSM5581045 Sample1.Human.203877620030_R01C01
GSM5581046 Sample2.Human.203877620030_R02C01
GSM5581047 Sample3.Human.203877620030_R03C01
Relations
BioProject PRJNA763593

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184213_Explanation_of_characteristic_variables.docx.gz 12.6 Kb (ftp)(http) DOCX
GSE184213_RAW.tar 72.5 Mb (http)(custom) TAR (of IDAT)
GSE184213_README.docx 12.7 Kb (ftp)(http) DOCX
GSE184213_datBetaNormalized.csv.gz 28.2 Mb (ftp)(http) CSV
Processed data are available on Series record
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