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Series GSE184238 Query DataSets for GSE184238
Status Public on Apr 26, 2022
Title Epigenetic and Transcriptional Dysregulation in T cells of patients with Atopic Dermatitis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35576187
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 HG010730 Virus-driven human gene misregulation in disease CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 NS099068 Binding of Epstein Barr Virus EBNA2 unifies multiple sclerosis genetic mechanisms CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 GM055479 Biochemical and Computational Analysis of Notch signal transduction CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
U01 AI130830 Gene Regulation as a Foundation for Autoimmune Disease Prevention CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 DK107502 Mechanisms of genetic risk at 2p23 in Eosinophilic Esophagitis CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 AI148276 Genomics of Inflammatory Bowel Disease CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
U19 AI070235 Epithelial Genes in Allergic Inflammation CHILDREN'S HOSPITAL MEDICAL CENTER Gurjit K. Khurana Hershey
U01 HG011172 Polygenic Risk Scores for Healthier African American Families CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
P30 AR070549 Cincinnati Rheumatic Diseases Resource Center CHILDREN'S HOSPITAL MEDICAL CENTER SUSAN D THOMPSON
R01 AR073228 Transcription Factor Genetics in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 AR073228 Transcription Factor Genetics in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 AI024717 Genetic Linkage in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 AI024717 Genetic Linkage in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
Submission date Sep 15, 2021
Last update date Oct 23, 2023
Contact name Matthew Weirauch
E-mail(s) Matthew.Weirauch@cchmc.org
Organization name Cincinnati Children's Hospital Medical Center
Department Center for Autoimmune Genomics and Etiology (CAGE)
Street address 3333 Burnet Avenue
City Cincinnati
State/province Ohio
ZIP/Postal code 45229-3026
Country USA
 
Platforms (2)
GPL23227 BGISEQ-500 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (48)
GSM5554054 ATAC-seq: Atopic Dermatitis subject 1 (AD1)
GSM5554055 ATAC-seq: Atopic Dermatitis subject 2 (AD2)
GSM5554056 ATAC-seq: Atopic Dermatitis subject 3 (AD3)
This SuperSeries is composed of the following SubSeries:
GSE183257 Epigenetic and Transcriptional Dysregulation in T cells of patients with Atopic Dermatitis [ATAC-seq]
GSE184237 Epigenetic and Transcriptional Dysregulation in T cells of patients with Atopic Dermatitis [RNA-Seq]
GSE184301 Epigenetic and Transcriptional Dysregulation in T cells of patients with Atopic Dermatitis [ChIP-seq]
Relations
BioProject PRJNA763632

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184238_RAW.tar 8.1 Gb (http)(custom) TAR (of BIM, BW, NARROWPEAK, TSV)
SRA Run SelectorHelp

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