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GEO accession:
Series GSE184263
Query DataSets for GSE184263
Status
Public on Jun 30, 2023
Title
CD4+ T cell subsets during LCMV infection
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Sep 16, 2021
Last update date
Jun 30, 2023
Contact name
Ananda Goldrath
Organization name
UCSD
Street address
9500 Gilman Dr
City
La Jolla
State/province
CA
ZIP/Postal code
92093-0377
Country
USA
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (57)
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GSM5582563
Bcl6KO_SPL_1
GSM5582564
Bcl6KO_SPL_2
GSM5582565
Bcl6KO_IEL_1
GSM5582566
Bcl6KO_IEL_2
GSM5582567
Bcl6KO_LPL_1
GSM5582568
Bcl6KO_LPL_2
GSM5582632
D21_SPL_1 [scRNA-seq]
GSM5582633
D21_LPL_1 [scRNA-seq]
GSM5582634
D21_SPL_2 [scRNA-seq]
GSM5582635
D21_LPL_2 [scRNA-seq]
GSM5582636
D7_SPL_1 [scRNA-seq]
GSM5582637
D7_IEL_1 [scRNA-seq]
GSM5582638
D7_LPL_1 [scRNA-seq]
GSM5582639
D7_SPL_2 [scRNA-seq]
GSM5582640
D7_IEL_2 [scRNA-seq]
GSM5582641
D7_LPL_2 [scRNA-seq]
GSM5582642
D7_Bcl6KO_SPL [scRNA-seq]
GSM5582643
D7_Bcl6KO_IEL [scRNA-seq]
GSM5582644
D7_Bcl6KO_LPL [scRNA-seq]
GSM5582645
D7_IEL_Rep1
GSM5582646
D7_IEL_Rep2
GSM5582647
D7_LPL_Rep1
GSM5582648
D7_LPL_Rep2
GSM5582649
D7_Tfh_Rep1
GSM5582650
D7_Tfh_Rep2
GSM5582651
D7_Th1_Rep1
GSM5582652
D7_Th1_Rep2
GSM5582653
D20_Tfh_Rep1
GSM5582654
D20_Tfh_Rep2
GSM5582655
D20_Th1_Rep1
GSM5582656
D20_Th1_Rep2
GSM5582663
T4.TN.Sp#1 [TN_1]
GSM5582664
T4.TN.Sp#2 [TN_5]
GSM5582665
T4.Tfh.LCMV.d7.Sp#1 [D7_Tfh_1]
GSM5582666
T4.Tfh.LCMV.d7.Sp#3 [D7_Tfh_3]
GSM5582667
T4.Tfh.LCMV.d7.Sp#4 [D7_Tfh_4]
GSM5582668
T4.Tfh.LCMV.d7.Sp#5 [D7_Tfh_5]
GSM5582669
T4.Th1.LCMV.d7.Sp#1 [D7_Th1_1]
GSM5582670
T4.Th1.LCMV.d7.Sp#2 [D7_Th1_2]
GSM5582671
T4.Th1.LCMV.d7.Sp#4 [D7_Th1_4]
GSM5582672
T4.Th1.LCMV.d7.Sp#5 [D7_Th1_5]
GSM5582673
T4.IEL.LCMV.d7.SI#3 [D7_IEL_3]
GSM5582674
T4.IEL.LCMV.d7.SI#4 [D7_IEL_4]
GSM5582675
T4.IEL.LCMV.d7.SI#5 [D7_IEL_5]
GSM5582676
T4.LP.LCMV.d7.SI#3 [D7_LPL_3]
GSM5582677
T4.LP.LCMV.d7.SI#4 [D7_LPL_4]
GSM5582678
T4.LP.LCMV.d7.SI#5 [D7_LPL_5]
GSM5582679
T4.Tfh.LCMV.d21.Sp#2 [D21_Tfh_2]
GSM5582680
T4.Tfh.LCMV.d21.Sp#3 [D21_Tfh_3]
GSM5582681
T4.Tfh.LCMV.d21.Sp#4 [D21_Tfh_4]
GSM5582682
T4.Th1.LCMV.d21.Sp#1 [D21_Th1_1]
GSM5582683
T4.Th1.LCMV.d21.Sp#2 [D21_Th1_2]
GSM5582684
T4.IEL.LCMV.d21.SI#1 [D21_IEL_1]
GSM5582685
T4.IEL.LCMV.d21.SI#3 [D21_IEL_3]
GSM5582686
T4.IEL.LCMV.d21.SI#4 [D21_IEL_4]
GSM5582687
T4.LP.LCMV.d21.SI#3 [D21_LPL_3]
GSM5582688
T4.LP.LCMV.d21.SI#4 [D21_LPL_4]
This SuperSeries is composed of the following SubSeries:
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GSE184252
RNA-Seq of Bcl6-KO CD4+ T cell subsets during LCMV infection
GSE184259
Single-cell RNA-Seq of wild-type and Bcl6KO CD4+ T cell subsets during LCMV infection
GSE184260
ATAC-Seq of CD4+ T cell subsets during LCMV infection
GSE184262
RNA-Seq of wild-type CD4+ T cell subsets during LCMV infection
Relations
BioProject
PRJNA763824
Download family
Format
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Supplementary file
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File type/resource
GSE184263_RAW.tar
132.6 Mb
(http)
(custom)
TAR (of MTX, TSV)
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