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Series GSE184658 Query DataSets for GSE184658
Status Public on Mar 06, 2022
Title A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [ChIP-Seq]
Organism Plasmodium falciparum
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome-wide occupancy of sixteen PfApiAP2 transcription factors and PfHP1 throughout the intraerythrocytic cycle
 
Overall design 2 biological ChIP-seq replicates using an antibody against either GFP or PfHP1, and input DNA
 
Contributor(s) Jiang M, Shang X, Zhang Q
Citation(s) 35288749
Submission date Sep 23, 2021
Last update date Apr 19, 2022
Contact name Mei Jiang
E-mail(s) gingerplum@hotmail.com
Phone 862165985138
Organization name Tongji University
Street address 1239 Siping Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL26835 HiSeq X Ten (Plasmodium falciparum)
Samples (144)
GSM5594652 3D7_AP2-06A-GFP_S_AP2-06A_ChIP-seq, Rep1
GSM5594653 3D7_AP2-06A-GFP_S_AP2-06A_ChIP-seq, Rep2
GSM5594654 3D7_AP2-06A-GFP_S_input
This SubSeries is part of SuperSeries:
GSE184659 A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development
Relations
BioProject PRJNA765872
SRA SRP339069

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184658_RAW.tar 11.4 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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