NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE185248 Query DataSets for GSE185248
Status Public on Oct 01, 2023
Title Translatomics coupled with transcriptomics reveals a novel mechanism of oral carcinogenesis [Ribo-seq]
Organism Homo sapiens
Experiment type Other
Summary Oral and oropharyngeal squamous cell carcinoma (OSCC and OPSCC) represents an increasing problem in the global public health. OPSCC is the most frequent malignancy in oral cavity, with an overall increasing incidence and mortality. In view of its unclear exact mechanism and lack of optimized prevention and treatment methods, new biomarkers are needed to characterize the diversity of cancer and to explore effective treatment targets. This study combined translatomics and transcriptomics to analyze the differential genes in human oral cancer and adjacent tissues, in order to provide a new perspective for the prevention and treatment of OPSCC.
 
Overall design Ribosome profiling sequencing of oral mucosa of human that divived into tumor tissue and paracancerous tissue of oral cavity carcinomas
 
Contributor(s) Song T, Wei C
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 04, 2021
Last update date Oct 02, 2023
Contact name Can Wei
E-mail(s) canwei528@126.com
Organization name Harbin Medical University
Department Department of Pathophysiology
Street address Baojian Road
City Harbin
ZIP/Postal code 150081
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (5)
GSM5608764 OC1 Riboseq
GSM5608765 OC2 Riboseq
GSM5608766 OC3 Riboseq
This SubSeries is part of SuperSeries:
GSE185250 Translatomics coupled with transcriptomics reveals a novel mechanism of oral carcinogenesis
Relations
BioProject PRJNA768399
SRA SRP339889

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185248_RAW.tar 490.0 Kb (http)(custom) TAR (of TXT)
GSE185248_Raw_gene_counts_matrix.txt.gz 226.5 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap