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Series GSE185815 Query DataSets for GSE185815
Status Public on Jun 17, 2024
Title Comparative RNAseq Between Killifish Species
Organisms Aphyosemion australe; Iconisemion striatum; Nothobranchius furzeri
Experiment type Expression profiling by high throughput sequencing
Summary We evaluate the global gene expression changes that occur during a stage-matched developmental window in a closely related set of killifish species.
 
Overall design Single timepoint examination the global gene expression changes during pre-diapuase development in the African turquoise killifish, the red-striped, and the lyretail killifish.
 
Contributor(s)  Singh PP, Reeves GA, Contrepois K, Papsdorf K, Miklas J, Hu C, Ellenberger M, Snyder MP, Brunet A
Citation(s) 38810644
Submission date Oct 13, 2021
Last update date Jun 18, 2024
Contact name Anne Brunet
E-mail(s) abrunet1@stanford.edu
Organization name Stanford University
Department Genetics
Lab Brunet Lab
Street address 290 Jane Stanford Way
City Stanford
State/province California
ZIP/Postal code 94305
Country USA
 
Platforms (4)
GPL30849 Illumina HiSeq 4000 (Aphyosemion australe)
GPL30850 Illumina HiSeq 4000 (Iconisemion striatum)
GPL30851 Illumina HiSeq 4000 (Nothobranchius furzeri)
Samples (145)
GSM5624079 Aaus Pre-Diapause RNAseq Rep1
GSM5624080 Aaus Pre-Diapause RNAseq Rep2
GSM5624081 Aaus Pre-Diapause RNAseq Rep3
This SubSeries is part of SuperSeries:
GSE185817 Comparative seq Between Killifish Species
Relations
BioProject PRJNA770916
SRA SRP341180

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185815_Aaus_Astr_preDia_Readcounts.csv.gz 748.7 Kb (ftp)(http) CSV
GSE185815_Nfur_preDia_Readcounts.csv.gz 248.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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