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Series GSE186436 Query DataSets for GSE186436
Status Public on Dec 16, 2021
Title RNAseq analysis of liver transcriptomes to understand the effect of humoral immunodeficiency on liver function
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Objective: The objective of this study was to understand how humoral immuno-deficiency influences molecular crosstalk between the ileum and liver, and liver bile acid metabolism. RNAseq was performed to characterize liver transcriptomes pf WT and CD19-/- mice under steady-state conditions.
 
Overall design examination of liver transcriptomes of WT and CD19-/- mice
 
Contributor(s) Kubinak JL, Altomare D, Ji H, Shtutman MS
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 22, 2021
Last update date Dec 16, 2021
Contact name HAO JI
E-mail(s) ji5@email.sc.edu
Phone 8037774689
Organization name University of South Carolina
Department College of Pharmacy
Street address 715 SUMTER ST CLS RM 109
City COLUMBIA
State/province SC
ZIP/Postal code 29208
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (10)
GSM5651577 LIVER HC260
GSM5651578 LIVER HC262
GSM5651579 LIVER HC281
Relations
BioProject PRJNA773786
SRA SRP342745

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186436_20180717Counts.txt.gz 3.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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