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Series GSE186676 Query DataSets for GSE186676
Status Public on Oct 29, 2021
Title Expression factors for oxalate stimulation in HEK293T cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary parental HEK293T were challenged with 1064 µg/cm2 calcium oxalate monohydrate (COM) or sodium oxalate (NaOx) 4mM or vehicle for 24 hours and DNA microarray was performed. We observed and selected two-fold upregulation of laminin, beta 3 (LAMB3), early growth response 1 (EGR1), gremlin 1, DAN family BMP antagonist, Ca++-dependent secretion activator 2, Ras association domain family member 3, interleukin 33 and bone morphogenetic protein 8a , and two-fold down-regulation of interleukin 37 and intercellular adhesion molecule 1 in COM lord compared to vhicle.
 
Overall design parental HEK293T were challenged with 1064 µg/cm2 calcium oxalate monohydrate (COM) or sodium oxalate (NaOx) 4mM or vehicle for 24 hours.Total RNA was isolated from cells using RNeasy Plus Mini Kit (QIAGEN) and subjected to microarray data collection at Agilent Technologies Japan, Ltd. (Tokyo Japan) under following conditions.We compared the COM load sample (SAMPLE2; AR3085_02) with the vhicle sample(SAMPLE1; AR3085_01).
 
Contributor(s) Sugiura H
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Submission date Oct 27, 2021
Last update date Oct 31, 2021
Contact name Hidekazu Sugiura
E-mail(s) sugiura@twmu.ac.jp
Organization name Tokyo Women’s Medical University
Street address Kawada-cho 8-1
City Sinjuku-ku
State/province Tokyo
ZIP/Postal code 162-8666
Country Japan
 
Platforms (1)
GPL20844 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Feature Number Version]
Samples (3)
GSM5658915 AR3085_01
GSM5658916 AR3085_02
GSM5658917 AR3085_03
Relations
BioProject PRJNA775058

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186676_20211026HS_Processednormalized_data.xlsx 35.6 Mb (ftp)(http) XLSX
GSE186676_RAW.tar 19.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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