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| Status |
Public on Dec 25, 2021 |
| Title |
Integrative analysis of lncRNA-miRNA-mRNA regulatory network reveals candidate lncRNAs responsible for meat quality in goats |
| Organism |
Capra hircus |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Our analysis revealed the unique and common lncRNA-miRNA-mRNA networks of two kinds of adipocytes. Several lncRNAs that regulate goat meat quality were identified, such as XR_001918647.1, XR_001917728.1, XR_001297263.2 and LNC_004191. Our study utilized RNA-seq analysis to predict the functions of lncRNA on goat meat quality. Furthermore, our findings of lncRNA-miRNA-mRNA network, may contribute to a better understanding of the molecular mechanisms underlying in goat meat quality and provide a theoretical basis for further goat molecular breeding.
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| |
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| Overall design |
Examining lncRNA and mRNA information related to the differentiation of 2 adipocyte species in goats
lncRNA sequencing of intramuscular and subcutaneous adipocytes from goats before and after differentiation
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| |
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| Contributor(s) |
Lin Y |
| Citation(s) |
35600305 |
| |
| Submission date |
Nov 02, 2021 |
| Last update date |
May 26, 2022 |
| Contact name |
changsheng he |
| E-mail(s) |
hcs0903@126.com
|
| Phone |
13890753825
|
| Organization name |
southwest minzu university
|
| Street address |
No. 16, South Section, 1st Ring Roa
|
| City |
Chengdu |
| ZIP/Postal code |
610041 |
| Country |
China |
| |
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| Platforms (1) |
| GPL15473 |
Illumina HiSeq 2000 (Capra hircus) |
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| Samples (20)
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| Relations |
| BioProject |
PRJNA777229 |
| SRA |
SRP344212 |
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