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Series GSE189872 Query DataSets for GSE189872
Status Public on May 16, 2022
Title Nano-TRAP Input and IP sequencing of WT and Rpl3l-/- mouse hearts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RPL3L is a ribosomal protein expressed exclusively in adult straited muscle tissues, and a paralogue of the ubiquitously expressed RPL3. Here, we are looking into the effects of Rpl3l knockout on translation in adult mice hearts.
 
Overall design Nano-TRAP (Input and IP) done on WT and Rpl3l-/- mouse hearts in biological triplicates.
 
Contributor(s) Novoa E, Milenkovic I
Citation(s) 36882085
https://doi.org/10.1101/2021.12.04.471171
Submission date Nov 30, 2021
Last update date Sep 08, 2023
Contact name Eva Maria Novoa
E-mail(s) evamaria.novoa@gmail.com
Phone +34933160260
Organization name Center for Genomic Regulation
Lab Epitranscriptomics and RNA Dynamics
Street address Dr. Aiguader 88
City Barcelona
ZIP/Postal code 08003
Country Spain
 
Platforms (1)
GPL24973 MinION (Mus musculus)
Samples (12)
GSM5708876 IP_WT1
GSM5708877 IP_WT2
GSM5708878 IP_WT3
Relations
BioProject PRJNA784937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189872_RAW.tar 2.2 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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