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Series GSE190705 Query DataSets for GSE190705
Status Public on Aug 08, 2022
Title Transcriptomics of IL9 and IL13-treated human colonic epithelial organoids
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Mapping of transcriptional changes elicited by cytokines mediating Th2 and Th9 responses in human colonic organoids
 
Overall design Colonic organoids were derived from crypts isolated from biopsies of three healthy individuals. The effects of treatment with IL9 or IL13 for 24 hours was evaluated in comparison with untreated organoids from the same donors.
 
Contributor(s) Pavlidis P, Tsakmaki A, Cozzetto D, Bewick G, Powell N
Citation(s) 36170836, 36192482
Submission date Dec 11, 2021
Last update date Nov 07, 2022
Contact name Nick Powell
E-mail(s) npowell@ic.ac.uk
Organization name Imperial College London
Department Department of Metabolism, Digestion and Reproduction
Street address Du Cane Road
City London
ZIP/Postal code W12 0NN
Country United Kingdom
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (9)
GSM5729381 CTL: untreated colonoid donor 5
GSM5729382 IL13: IL13 treated colonoid donor 5
GSM5729383 IL9: IL9 treated colonoid donor 5
Relations
BioProject PRJNA788129

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190705_read_counts.txt.gz 570.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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