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Series GSE190757 Query DataSets for GSE190757
Status Public on May 23, 2023
Title Genetic perturbation of AMP biosynthesis extends lifespan and restores metabolic health in a naturally short-lived vertebrate
Organism Nothobranchius furzeri
Experiment type Expression profiling by high throughput sequencing
Summary During aging, the loss of metabolic homeostasis drives a myriad of pathologies. A central regulator of cellular energy, the AMP-activated protein kinase (AMPK), orchestrates organismal metabolism. However, direct genetic manipulations of the AMPK complex in mice have, so far, produced detrimental phenotypes. Here, as an alternative approach, we alter energy homeostasis by manipulating the upstream nucleotide pool. Using the turquoise killifish, we mutate APRT, a key enzyme in AMP biosynthesis, and extend the lifespan of heterozygous males. Next, applying an integrated omics approach identify that metabolic functions are rejuvenated in old mutants, which also display a fasting-like metabolic profile and resistance to high-fat diet. On the cellular level, heterozygous cells exhibit enhanced nutrient sensitivity, reduced ATP levels, and AMPK ¬activation. Finally, lifelong intermittent fasting abolishes the longevity benefits. Our findings suggest that perturbing AMP biosynthesis may modulate vertebrate lifespan, and propose APRT as a promising target for promoting metabolic health.
 
Overall design Samples of livers and muscle of the Nothobranchius furzeri at different experimental conditions, including Age: 6.5 weeks-old (young) and 15 weeks-old (old); Genotype: wild-type (WT) and APRT heterozygous (Het); Feeding condition: fully fed (full) and starved 24h (fasted); and Sex: males (M) and females (F). The muscles and livers were extracted from the same fish.
 
Contributor(s) Astre G, Atlan T, Goshtchevsky U, Oron-Gottesman A, Smirnov M, Shapira K, Velan A, Deelen J, Levy T, Levanon EY, Harel I
Citation(s) 37321215
Submission date Dec 13, 2021
Last update date Jun 21, 2023
Contact name Itamar Harel
E-mail(s) itamarh@mail.huji.ac.il
Organization name The Hebrew University of Jerusalem
Department Genetics
Lab Harel
Street address Givat Ram
City Jerusalem
ZIP/Postal code 9190401
Country Israel
 
Platforms (2)
GPL26990 Illumina NextSeq 500 (Nothobranchius furzeri)
GPL33195 NextSeq 2000 (Nothobranchius furzeri)
Samples (68)
GSM5730981 Nfr Liver Old WT Full M smp4
GSM5730982 Nfr Liver Old WT Full M smp5
GSM5730983 Nfr Liver Old WT Full M smp6
Relations
BioProject PRJNA788399
SRA SRP350511

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190757_matrix_expression_RNAseq_star0621.txt.gz 1.3 Mb (ftp)(http) TXT
GSE190757_matrix_expression_RNAseq_star2301_2_fasted.csv.gz 870.0 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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