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Series GSE192471 Query DataSets for GSE192471
Status Public on Jan 04, 2022
Title Effects of the SLICK1 mutation in PRLR on regulation of core body temperature and global gene expression in liver in cattle
Organism Bos taurus
Experiment type Expression profiling by high throughput sequencing
Summary Determine the effect of 0,1, or 2 copies of the slick mutation in the PRLR on gene expression
 
Overall design For one exp, liver was obtained from daughters of slick bulls (Blanco or Lone Ranger) ; daughters inherited 0 (FREE) or 1 (SLICK) copies of the SLICK allele. For the other study, liver was obtained from animals with 1 (S1) or 2 (S2) copies of the SLICK allele
 
Contributor(s) Sosa F, Santos JE, Rae DO, Larson CC, Macchietto M, E Abrahante J, Amaral TF, Denicol AC, Sonstegard T, Hansen PJ
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Submission date Dec 22, 2021
Last update date Jan 04, 2022
Contact name Peter James Hansen
E-mail(s) hansen@animal.ufl.edu
Phone 352-359-5753
Organization name University of Florida
Department Animal Sciences
Lab Bovine Embryo Lab
Street address 2250 SW Shealy Drive
City Gainesville
State/province FL
ZIP/Postal code 32611-0910
Country USA
 
Platforms (1)
GPL26012 Illumina NovaSeq 6000 (Bos taurus)
Samples (34)
GSM5747608 Liver_SLICK_BLANCO_1
GSM5747609 Liver_SLICK_RANGER_1
GSM5747610 Liver_SLICK_BLANCO_2
Relations
BioProject PRJNA791623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE192471_DEG_Results_Liver_TruSeq_slick_vs_free.txt.gz 2.7 Mb (ftp)(http) TXT
GSE192471_Liver_CPMnormalized_Counts.txt.gz 2.2 Mb (ftp)(http) TXT
GSE192471_Liver_Raw_Counts.txt.gz 894.8 Kb (ftp)(http) TXT
GSE192471_Liver_SMARTer_Raw_Counts.txt.gz 2.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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