|
| Status |
Public on Aug 02, 2023 |
| Title |
Genome-wide analysis of planarian piRNAs |
| Organism |
Schmidtea mediterranea |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Sample dataset for the described bioinformatic pipeline (piRNAnalyzer) comprising epidermal piRNA libraries of Schmidtea mediterranea
|
| |
|
| Overall design |
Three biological replicates of piRNA libraries from Schmidtea mediterranea were sub-sampled to 1.5 million reads each in order to provide a sample dataset for the described bioinformatic pipeline piRNAnalyzer
|
| Web link |
https://link.springer.com/protocol/10.1007/978-1-0716-3275-8_3
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| |
|
| Contributor(s) |
Pittroff A, Kim IV, Demtröder T, Kuhn C |
| Citation(s) |
37428370 |
| |
| Submission date |
Dec 23, 2021 |
| Last update date |
Aug 03, 2023 |
| Contact name |
Andreas Pittroff |
| E-mail(s) |
andreas.pittroff@uni-bayreuth.de
|
| Organization name |
University of Bayreuth
|
| Department |
BIOmac Research Center, NW1
|
| Lab |
Kuhn Lab
|
| Street address |
Universitätsstr. 30
|
| City |
Bayreuth |
| ZIP/Postal code |
95447 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL21689 |
Illumina NextSeq 500 (Schmidtea mediterranea) |
|
| Samples (3) |
|
| Relations |
| BioProject |
PRJNA791843 |
