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Status |
Public on Mar 31, 2022 |
Title |
Single cell RNA-seq of brain macrophages and microglia in mice lacking Notch3 |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
In this single cell RNAseq analysis, we compared brain macrophage and microglia transcriptomes from Notch3 knock out and control.
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Overall design |
Brain single cells from Notch3 knockout and control were sorted into 384-well-plates and RNA-sequenced using the SmartSeq2 method
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Contributor(s) |
Del Gaudio F, Lendahl U |
Citation(s) |
- Masuda T, Amann L, Monaco G, Sankowski R et al. Specification of CNS macrophage subsets occurs postnatally in defined niches. Nature 2022 Apr;604(7907):740-748. PMID: 35444273
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Submission date |
Dec 24, 2021 |
Last update date |
May 11, 2022 |
Contact name |
L. H. |
Organization name |
Uppsala University
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Street address |
Dag Hammarskjölds Väg 20
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City |
Uppsala |
ZIP/Postal code |
751 85 |
Country |
Sweden |
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Platforms (1) |
GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
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Samples (629)
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Relations |
BioProject |
PRJNA792144 |