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Series GSE193334 Query DataSets for GSE193334
Status Public on Apr 20, 2023
Title Gene expression profiling of Six1-null developing inner ear.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Six1-null mice display developmental defects in the inner ear associated to aberrant senescence. To understand the molecular basis of this phenotype, here we investigated gene expression profiles of otic vesicles from Six1-null and wild-type embryos at developmental stage E10.5.
 
Overall design RNA expression profiles were obtained from otic vesicles dissected from Six1-/- and Six1+/+ E10.5 mouse embryos. For each genotype, three pools of 6 vesicles (from three embryos) were used. Samples were analyzed by RNA-Seq using Illumina HiSeq.
 
Contributor(s) de Lope C, Palmero I
Citation(s) 37017267
Submission date Jan 09, 2022
Last update date Apr 20, 2023
Contact name Ignacio Palmero
E-mail(s) ipalmero@iib.uam.es
Organization name CSIC
Street address Arturo Duperier, 4.
City Madrid
State/province Madrid
ZIP/Postal code 28029
Country Spain
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM5792385 wt rep1
GSM5792386 wt rep2
GSM5792387 wt rep3
Relations
BioProject PRJNA795808

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193334_Processed_data_SIx1_OV.txt.gz 827.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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