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Series GSE193756 Query DataSets for GSE193756
Status Public on Jan 15, 2023
Title TGFbR signaling in squamous epithelial cells plays a fundamental role in controlling tissue specific allergic inflammation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Allergic diseases are becoming a global health crisis. Individuals harboring loss-of-function variants in transforming growth factor beta receptor (TGFbR) have an increased prevalence of allergic disease, but the mechanisms responsible are poorly understood. We demonstrate that mice harboring a variant identified in patients spontaneously develop disease that clinically, immunologically, histologically, and transcriptionally recapitulates eosinophilic esophagitis, a condition characterized by allergic inflammation in the esophagus. Diminished TGFbR signaling impairs epithelial cell maturation, resulting in local expression of inflammatory mediators that drive accumulation and activation of eosinophils, mast cells, T cells, and innate lymphoid cells. Our work reveals a fundamental, non-redundant, cell-intrinsic role for TGFbR signaling in epithelial cells needed to maintain immune homeostasis and prevent allergic inflammation, independent of barrier function or adaptive immune tolerance. Moreover, we demonstrate that epithelial dysfunction alone is sufficient to initiate and perpetuate allergic inflammation, which has implications for the prevention and treatment of allergic diseases.
 
Overall design 18 total samples were mRNA sequenced, with 9 WT, and 9 TGFBR1M318R mutant mice.
Web link https://www.science.org/doi/10.1126/sciimmunol.abp9940
 
Contributor(s) Laky K, Kinard JL, Li JM, Moore IM, Lack JB, Fischer ER, Kabat J, Minai M, Latanich R, Zachos NC, Limkar AR, Rosenberg HF, Thompson RW, Wynn TA, Dietz HC, Guerrerio AL, Frischmeyer-Guerrerio PA
Citation(s) 36608150
Submission date Jan 15, 2022
Last update date Apr 17, 2023
Contact name Karen Laky
E-mail(s) klaky@niaid.nih.gov
Phone 301 961-5419
Organization name NIH
Department NIAID
Lab FARS
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM5820510 TGFBR1 mutant replicate 1
GSM5820511 TGFBR1 mutant replicate 2
GSM5820512 TGFBR1 mutant replicate 3
Relations
BioProject PRJNA797650

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193756_fpkm.txt.gz 1.2 Mb (ftp)(http) TXT
GSE193756_raw_counts.txt.gz 1.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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