|
| Status |
Public on Oct 13, 2010 |
| Title |
ETV1 knockdown in GIST cell lines |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
ETV1 is highly expressed in GIST cells and required for their survival and growth. To identify genes and pathways regulated by ETV1 in GIST, we performed expression profiles of GIST cells after ETV1 knockdown.
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| |
|
| Overall design |
Two GIST cell lines (GIST48 and GIST882) were infected in duplicate with three shRNA viruses (Scrambled, ETV1sh1-B11TRCN0000013923, ETV1sh2-TRCN0000013925). Four days after infection, RNA was harvested for expression profiling.
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| |
|
| Contributor(s) |
Chi P, Chen Y, Allis CD, Sawyers CL |
| Citation(s) |
20927104 |
| |
| Submission date |
Dec 09, 2009 |
| Last update date |
Aug 16, 2018 |
| Contact name |
Yu Chen |
| E-mail(s) |
cheny1@mskcc.org
|
| Phone |
646-888-3356
|
| Organization name |
Memorial Sloan Kettering Cancer Center
|
| Department |
Human Oncology and Pathogenesis Program
|
| Lab |
Chen
|
| Street address |
1275 York Ave, Box 20
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6947 |
Illumina HumanHT-12 V3.0 expression beadchip |
|
| Samples (12)
|
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| This SubSeries is part of SuperSeries: |
| GSE22852 |
Gastrointestinal stromal tumor GIST: gene expresssion and ChIP analyses |
|
| Relations |
| BioProject |
PRJNA129737 |
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