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Series GSE195878 Query DataSets for GSE195878
Status Public on Feb 02, 2022
Title Diverse transcriptome response to salinity change in cod subpopulations from the Baltic Sea
Organism Gadus morhua
Experiment type Expression profiling by array
Summary The Atlantic cod (Gadus morhua L.) is one of the most important species in the Baltic Sea with high ecological and economical value. To explore the differences in adaptation to salinity between Baltic cod subpopulation: western (Kiel Bight) and eastern (Gdańsk Bay) samples were analyzed through genome-wide oligonucleotide microarray.
 
Overall design Atlantic cod samples (n=81) were collected from two subdivisions: the Schleifjord, Kiel Bight (KIEL-18PSU) - SD22 and Gdańsk Bay (GDA - 8PSU) - SD 26. Gene expression changes in gills were assessed with 44 k oligonucleotide microarray
 
Contributor(s) Malachowicz M, Krasnov A, Wenne R
Citation(s) 38067188
Submission date Feb 01, 2022
Last update date Dec 14, 2023
Contact name Magdalena Malachowicz
E-mail(s) mwarzecha@iopan.gda.pl
Organization name Institute of Oceanology Polish Academy of Sciences
Street address Powstańców Warszawy
City Sopot
ZIP/Postal code 81-712
Country Poland
 
Platforms (1)
GPL18775 Agilent-048047 Genome-wide Atlantic cod microarray, second version_ACIQ2
Samples (81)
GSM5855567 GDA_gill_control_1
GSM5855568 GDA_gill_control_2
GSM5855569 GDA_gill_control_3
Relations
BioProject PRJNA802543

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE195878_RAW.tar 982.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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