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Series GSE196436 Query DataSets for GSE196436
Status Public on Feb 09, 2022
Title Interleukin-10 regulates reservoir establishment and persistence in antiretroviral therapy-treated, SIV-infected macaques
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary Interleukin (IL)-10 is an immunosuppressive cytokine that signals through STAT3 to regulate T follicular helper cell (TFH) differentiation and germinal center formation, which we propose acts as a determinant of HIV/SIV persistence. In SIV-infected macaques, levels of IL-10 in plasma and lymph node (LN) are induced by infection and not normalized with ART. During chronic infection, plasma IL-10 and transcriptomic signatures of IL-10 signaling were significantly correlated with the cell-associated SIV-DNA content within LN CD4+ memory subsets, including TFH, and predicted the frequency of CD4+ TFH and their cell-associated SIV-DNA content during ART, respectively. Notably, in ART-treated RMs, cells harboring SIV-DNA by DNAscope were preferentially found in the LN B-cell follicle in close proximity to IL-10. Finally, we demonstrate that the in vivo neutralization of soluble IL-10 in ART-treated, SIV-infected macaques significantly reduces B cell follicle maintenance and, by extension, cellular sites of viral persistence, including LN TFH and memory CD4+ T-cells expressing PD-1 and CTLA-4. Thus, these data support a role for IL-10 in maintaining a pool of target cells in lymphoid tissue that serve as a niche for viral persistence. Targeting IL-10 signaling to impair CD4+ T-cell survival and improve antiviral immune responses may represent a novel approach to limit viral persistence in ART-suppressed people living with HIV.
 
Overall design Evaluation of the safety and bioactivity of IL-10 neutralization in SIV-infected rhesus macaques receiving short-term ART.
 
Contributor(s) Harper J, Ribeiro SP, Chan CN, Aid M, Deleage C, Micci L, Pino M, Cervasi B, Raghunathan G, Rimmer E, Ayanoglu G, Wu G, Shenvi N, Barnard RJ, Prete GD, Busman-Sahay K, Bosinger S, Easley K, Howell BJ, Gorman D, Hazuda DJ, Estes JD, Sekaly R, Paiardini M
Citation(s) 35230978
Submission date Feb 09, 2022
Last update date May 12, 2022
Contact name Dan Barouch
Organization name BIDMC
Department CVVR
Lab Barouch Lab
Street address 3 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL20313 Illumina HiSeq 1000 (Macaca mulatta)
Samples (40)
GSM5884217 RBf16_d-10
GSM5884218 RBf16_d35
GSM5884219 RBf16_d167
Relations
BioProject PRJNA804895

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196436_processedData_geo_feb8.csv.gz 918.3 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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