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Series GSE196893 Query DataSets for GSE196893
Status Public on Mar 26, 2022
Title Ad26.COV2.S Prevents SARS-CoV-2 Induced Pathways of Inflammation and Thrombosis in Hamsters
Organism Mesocricetus auratus
Experiment type Expression profiling by high throughput sequencing
Summary Syrian golden hamsters exhibit features of severe disease after SARS-CoV-2 challenge and are therefore useful models of COVID-19 pathogenesis and prevention with vaccines. Recent studies have shown that SARS-CoV-2 infection stimulates type I interferon, myeloid, and inflammatory signatures similar to human disease, and that weight loss can be prevented with vaccines. However, the impact of vaccination on transcriptional programs associated with COVID-19 pathogenesis and protective adaptive immune responses is unknown. Here we show that SARS-CoV-2 challenge in hamsters stimulates myeloid and inflammatory programs as well as signatures of complement and thrombosis associated with human COVID-19. Notably, single-dose immunization with Ad26.COV2.S, an adenovirus serotype 26 vector (Ad26)-based vaccine expressing a stabilized SARS-CoV-2 spike protein, prevents the upregulation of these pathways such that the gene expression profiles of vaccinated hamsters are comparable to uninfected animals. Furthermore, we validated the protective efficacy of the Ad26.COV2.S against proinflammatory pathways and coagulation cascade in rhesus macaques by proteomics. Finally, we show that Ad26.COV2.S vaccination induces T and B cell signatures that correlate with binding and neutralizing antibody responses. These data provide further insights into the mechanisms of Ad26.COV2.S based protection against severe COVID-19 in hamsters.
 
Overall design In-depth analyses of bulk RNA-Seq transcriptomic profiling of lung tissues at day 4 post-SARS-CoV-2 WA1 challenge from Ad26.COV2.S vaccinated and sham unvaccinated hamsters.
 
Contributor(s) Aid M, Vidal SJ, Piedra-Mora C, Ducat S, Chan CN, Bondoc S, Colarusso A, Starke CE, Nekorchuk M, Busman-Sahay K, Estes JD, Martinot AJ, Barouch DH
Citation(s) 35395058
Submission date Feb 16, 2022
Last update date May 12, 2022
Contact name Dan Barouch
Organization name BIDMC
Department CVVR
Lab Barouch Lab
Street address 3 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL28997 Illumina NovaSeq 6000 (Mesocricetus auratus)
Samples (15)
GSM5904346 X234
GSM5904347 X238
GSM5904348 X244
Relations
BioProject PRJNA807676

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Supplementary file Size Download File type/resource
GSE196893_geo_feb14_norm.readcounts.csv.gz 1.2 Mb (ftp)(http) CSV
GSE196893_geo_feb14_raw.readcounts.csv.gz 472.7 Kb (ftp)(http) CSV
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Processed data are available on Series record

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