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| Status |
Public on Feb 23, 2022 |
| Title |
The histone demethylase PHF8 regulates TGFβ signaling and promotes melanoma metastasis [RNA-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The contribution of epigenetic dysregulation to metastasis remains understudied. Through a meta-analysis of gene expression datasets followed by a mini-screen, we identified PHF8, a histone demethylase of the Jumonji C protein family, as a novel pro-metastatic gene in melanoma. Loss- and gain-of-function approaches demonstrate that PHF8 promotes cell invasion without affecting proliferation in vitro, and increases dissemination but not sub-cutaneous tumor growth in vivo, thus supporting its specific contribution to the acquisition of metastatic potential. PHF8 requires its histone demethylase activity to enhance melanoma cell invasion. Transcriptomic and epigenomic analyses revealed that PHF8 orchestrates a molecular program that directly controls the TGFβ signaling pathway and as a consequence, melanoma invasion and metastasis. Our findings bring a mechanistic understanding of epigenetic regulation of metastatic fitness in cancer, which may pave the way for improved therapeutic interventions.
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| Overall design |
PHF8 loss-of-function (sgRNA) cellular model was generated in SKMEL-147 melanoma cell line.
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| Contributor(s) |
Moubarak R, Hernando E |
| Citation(s) |
35179962 |
| |
| Submission date |
Feb 16, 2022 |
| Last update date |
Feb 23, 2022 |
| Contact name |
Igor Dolgalev |
| Organization name |
NYU Grossman School of Medicine
|
| Street address |
550 1st Ave
|
| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (9)
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| This SubSeries is part of SuperSeries: |
| GSE196906 |
The histone demethylase PHF8 regulates TGFβ signaling and promotes melanoma metastasis |
|
| Relations |
| BioProject |
PRJNA807691 |
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