NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE196995 Query DataSets for GSE196995
Status Public on Feb 19, 2022
Title The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Binding of Brg1, Sall1, H3K4me1, H3K27ac, and RNA Pol2 Ser2 to chromatin was measured by performing ChIP-seq in E16.5 wild type kidney.
 
Overall design Binding of Brg1, Sall1, H3K4me1, H3K27ac, and RNA Pol2 Ser2 to chromatin was measured by comparing specific chromatin binding to Input chromatin.
 
Contributor(s) Rauchman M, Basta J
Citation(s) 32504627
Submission date Feb 18, 2022
Last update date Feb 23, 2022
Contact name Jeannine M Basta
E-mail(s) jbasta@wustl.edu
Organization name Washington University in St. Louis
Department Internal Medicine/Nephrology
Lab Rauchman
Street address 660 S Euclid Ave, MSC 8126-0012-08
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (10)
GSM5906365 Brg1 rep 1
GSM5906366 Brg1 rep 2
GSM5906367 Sall1 rep 1
This SubSeries is part of SuperSeries:
GSE196997 The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation
Relations
BioProject PRJNA808314

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196995_Brg1.WT.E16.avg.enrichment.BigWig 454.0 Mb (ftp)(http) BIGWIG
GSE196995_H3K27Ac.WT.E16.enrichment.BigWig 455.9 Mb (ftp)(http) BIGWIG
GSE196995_H3K4me1.WT.E16.enrichment.BigWig 450.1 Mb (ftp)(http) BIGWIG
GSE196995_RNAPol2Ser2.WT.E16.enrichment.BigWig 449.8 Mb (ftp)(http) BIGWIG
GSE196995_Sall1.WT.E16.avg.enrichment.BigWig 454.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap