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Series GSE197189 Query DataSets for GSE197189
Status Public on Dec 31, 2022
Title Cystic fibrosis causes olfactory system defects by altering progenitor cell proliferation (scRNA-Seq)
Organism Sus scrofa
Experiment type Expression profiling by high throughput sequencing
Summary A reduced sense of smell has been reported in people with cystic fibrosis (CF). These olfactory defects have largely been attributed to secondary manifestations of the disease, such as inflammation of the nasal mucosa. Here we show that CFTR, the gene responsible for CF, is expressed in proliferating olfactory human cells and that newborn CFTR null pigs display ultrastructural abnormalities in the olfactory epithelium and olfactory bulbs. In the absence of CFTR, olfactory sensory neurons still produce odor-evoked activity, but mutant animals display defective odor-guided suckling behavior after birth. Consistent with epithelial changes, we found a reduced expression of genes implicated in cell cycle and development in globose basal cells (GBCs), the neurogenic progenitor cells in the olfactory epithelium. Targeted sequencing revealed enhanced CFTR expression in the subpopulation of GBCs that is actively proliferating. Furthermore, CFTR loss caused a global reduction in the number of sensory neurons and altered olfactory receptors expression. Our findings highlight a previously unknown role of CFTR in olfactory system function by regulating progenitor cell proliferation in the olfactory epithelium.
 
Overall design The molecular pathology of olfactory loss in CF.
 
Contributor(s) Caballero I, López-Gálvez R, Mbouamboua Y, Couralet M, Fleurot I, Pons N, Barrera-Conde M, Quílez-Playán N, Keller M, Klymiuk N, Robledo P, Barbry P, Chamero P
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Submission date Feb 22, 2022
Last update date Dec 31, 2022
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platforms (1)
GPL20983 Illumina NextSeq 500 (Sus scrofa)
Samples (2)
GSM5910845 Pig olfactory mucosa cells - 12_WT
GSM5910846 Pig olfactory mucosa cells - 15_CFTR
This SubSeries is part of SuperSeries:
GSE197187 Cystic fibrosis causes olfactory system defects by altering progenitor cell proliferation
Relations
BioProject PRJNA809339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197189_filtered_feature_bc_matrix_12_WT.txt.gz 10.8 Mb (ftp)(http) TXT
GSE197189_filtered_feature_bc_matrix_15_CFTR.txt.gz 11.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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