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Series GSE197223 Query DataSets for GSE197223
Status Public on Dec 31, 2022
Title Transcriptome profiling of left ventricles from Wildtype and KDM5B knockout mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Myocardial fibrosis is the most common pathological feather of adverse ventricular remodeling, and persistent fibrotic extension decreases myocardial compliance, promotes the development of heart failure. Epigenetics has been considered to play a potent regulatory role in the development of excessive myocardial fibrosis. Although, the explicit mechanism of epigenetic regulation in myocardial fibrosis still needs to be fully elucidated.Transcriptome microarray analysis was used to screen differentially expressed genes in myocardial tissues from KDM5B KO and littermate control WT mice at day 7 after MI operation.
 
Overall design 8-10-week-old male KDM5B KO mice and their corresponding WT mice were subjected to myocardial infarction by ligation of the left anterior descending coronary artery. At 7 days after myocardial infarction, the left ventricular samples were harvested and total RNA was isolated for hybridization on agilent microarray. Each group contain with 2 replicates
 
Contributor(s) Wang B, Liu X, Zhan Z
Citation(s) 36481938
Submission date Feb 22, 2022
Last update date Jan 04, 2023
Contact name Zhenzhen Zhan
E-mail(s) zhanzz@tongji.edu.cn
Organization name Shanghai East Hospital, Tongji University School of Medicine,
Department Research Center for Translational Medicine
Street address Jimo Road 150
City Shanghai
ZIP/Postal code 200120
Country China
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (4)
GSM5911296 heart_MI_7d_WT2_rep1
GSM5911297 heart_MI_7d_WT3_rep1
GSM5911298 heart_MI_7d_KO2_rep1
Relations
BioProject PRJNA809385

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197223_RAW.tar 36.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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