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Series GSE197479 Query DataSets for GSE197479
Status Public on Mar 31, 2022
Title Alfalfa (Medicago sativa L.) pho2 mutant plants hyperaccumulate phosphate [RNA-seq]
Organism Medicago sativa
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq and Iso-seq reads used used for gene charaterization. Pacbio amplicon sequencing reads used for mutant characterization
 
Overall design Iso-seq of 6 tissues of Medicago sativa
 
Contributor(s) Miller SS, Dornbusch MR, Farmer A, Huertas R, Gutierrez-Gonzalez JJ, Young ND, Samac DA, Curtin SJ
Citation(s) 35471600
Submission date Feb 25, 2022
Last update date Jun 23, 2022
Contact name Shaun J J Curtin
E-mail(s) shaun.curtin@usda.gov, curti242@umn.edu
Phone 6126255715
Organization name USDA-ARS-PSRU
Department Agronomy and Plant Genetics
Street address 1991 Upper Buford Circle, 411 Borlaug Hall
City St Paul
State/province MN
ZIP/Postal code 55108
Country USA
 
Platforms (1)
GPL17647 Illumina HiSeq 2000 (Medicago sativa)
Samples (6)
GSM5918324 flower-bud-pooled RNA-seq
GSM5918325 leaf-pooled RNA-seq
GSM5918326 nodules-pooled RNA-seq
This SubSeries is part of SuperSeries:
GSE197482 Alfalfa (Medicago sativa L.) pho2 mutant plants hyperaccumulate phosphate
Relations
BioProject PRJNA810492

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197479_Miller-et-al-Raw-RNA-seq-data.csv.gz 7.6 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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