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Series GSE197719 Query DataSets for GSE197719
Status Public on Mar 03, 2022
Title In vitro methylation studies in multiple human cell types [HumanMethylation450 array]
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary An Infinium microarray (Illumina HumanMethylation450 BeadChip) was used to generate DNA methylation data from human tissue samples.
 
Overall design n=27 samples. Endothelial Cell (n=13), keratinocyte (n=8), fibroblast (n=6).
Genome annotations of the array can be downloaded from https://support.illumina.com/downloads/infinium_humanmethylation450_product_files.html
 
Contributor(s) Horvath S, Raj K
Citation(s) 37688320
Submission date Mar 01, 2022
Last update date Oct 26, 2023
Contact name Steve Horvath
E-mail(s) shorvath@altoslabs.com
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (27)
GSM5928754 Sample1.Keratinocyte.201004900138_R01C01
GSM5928755 Sample2.Keratinocyte.201004900138_R02C01
GSM5928756 Sample3.EndothelialCell.201004900138_R03C01
This SubSeries is part of SuperSeries:
GSE197724 In vitro methylation studies in multiple human cell types
Relations
BioProject PRJNA811629

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197719_Explanation_of_characteristic_variables.docx.gz 13.6 Kb (ftp)(http) DOCX
GSE197719_RAW.tar 402.4 Mb (http)(custom) TAR (of IDAT)
GSE197719_datBetaNormalized.csv.gz 112.7 Mb (ftp)(http) CSV
Processed data are available on Series record
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