|
| Status |
Public on Mar 11, 2022 |
| Title |
Nuclear Lamina binds the EBV genome during latency and regulates viral gene expression |
| Organisms |
Homo sapiens; human gammaherpesvirus 4 |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35421198 |
| |
| Submission date |
Mar 11, 2022 |
| Last update date |
Apr 20, 2022 |
| Contact name |
Priyankara J Wickramasinghe |
| E-mail(s) |
priyaw@wistar.org
|
| Phone |
2154956837
|
| Organization name |
The Wistar Institute
|
| Department |
Bioinformatics
|
| Lab |
Genomics
|
| Street address |
3601 Spruce Street
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL30446 |
Illumina NextSeq 500 (Homo sapiens; Human gammaherpesvirus 4) |
|
| Samples (14)
|
| GSM5482001 |
Lamin AC WT cells under untreated condition, replicate 1 |
| GSM5482002 |
Lamin AC WT cells under untreated condition, replicate 2 |
| GSM5482003 |
Lamin AC WT cells under untreated condition, replicate 3 |
| GSM5482004 |
Lamin AC WT cells under treated with G9a inhibitor, replicate 1 |
| GSM5482005 |
Lamin AC WT cells under treated with G9a inhibitor, replicate 2 |
| GSM5482006 |
Lamin AC WT cells under treated with G9a inhibitor, replicate 3 |
| GSM5482007 |
Lamin AC KO cells under untreated condition, replicate 1 |
| GSM5482008 |
Lamin AC KO cells under untreated condition, replicate 2 |
| GSM5482009 |
Lamin AC KO cells under treated with G9a inhibitor, replicate 1 |
| GSM5482010 |
Lamin AC KO cells under treated with G9a inhibitor, replicate 2 |
| GSM5946397 |
Lamin AC WT cells, replicate 1 |
| GSM5946398 |
Lamin AC WT cells, replicate 2 |
| GSM5946399 |
Lamin AC KO cells, replicate 1 |
| GSM5946400 |
Lamin AC KO cells, replicate 2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE181012 |
Nuclear Lamina binds the EBV genome during latency and regulates viral gene expression [RNA-seq] |
| GSE198412 |
Nuclear lamina binds the EBV genome during latency and regulates viral gene expression [Hi-C] |
|
| Relations |
| BioProject |
PRJNA814988 |
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