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Series GSE198763 Query DataSets for GSE198763
Status Public on Jul 19, 2022
Title Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements
Organism Drosophila melanogaster
Experiment type Other
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://www.biorxiv.org/content/10.1101/2022.07.18.500462v1
 
Citation(s) 36735780
Submission date Mar 16, 2022
Last update date Mar 02, 2023
Contact name Jia-Ming Chang
E-mail(s) chang.jiaming@gmail.com
Organization name National Chengchi University
Department Department of Computer Science
Street address NO.64, Sec. 2, ZhiNan Rd., Wenshan District
City Taipei
ZIP/Postal code 11605
Country Taiwan
 
Platforms (2)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
GPL23702 HiSeq X Ten (Drosophila melanogaster)
Samples (44)
GSM5956402 HiC_Ras_control_rep1
GSM5956403 HiC_Ras_control_rep2
GSM5956404 HiC_Cp190-KO_rep1
This SuperSeries is composed of the following SubSeries:
GSE198760 Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [HiC]
GSE198761 Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [RNA-seq]
GSE198762 Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [ChIP-seq]
Relations
BioProject PRJNA816845

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198763_RAW.tar 10.3 Gb (http)(custom) TAR (of BED, GCMAP, WIG)
SRA Run SelectorHelp

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