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Series GSE199421 Query DataSets for GSE199421
Status Public on Apr 04, 2024
Title A highly conserved tRNA modification contributes to C. albicans filamentation and virulence
Organism Candida albicans
Experiment type Other
Summary tRNA modifications play important roles in maintaining translation accuracy in all domains of life. Disruptions in the tRNA modification machinery, especially of the anticodon stem loop, can be lethal for many bacteria and lead to a broad range of phenotypes in baker’s yeast. Very little is known about the function of tRNA modifications in host-pathogen interactions, where rapidly changing environments and stresses require fast adaptations. We found that two closely related fungal pathogens of humans, the highly pathogenic Candida albicans and its much less pathogenic sister species, Candida dubliniensis, differ in the function of a tRNA-modifying enzyme. This enzyme, Hma1, exhibits species­specific effects on the ability of the two fungi to grow in the hypha morphology, which is central to their virulence potential. We show that Hma1 has tRNA-threonylcarbamoyladenosine dehydratase activity, and its deletion alters ribosome occupancy, especially at 37°C—the body temperature of the human host. A C. albicans HMA1 deletion mutant also shows defects in adhesion to and invasion into human epithelial cells and shows reduced virulence in a fungal infection model. This links tRNA modifications to host-induced filamentation and virulence of one of the most important fungal pathogens of humans.
 
Overall design Candida albicans wild type and hma1 knockout strains were grown at 30°C and 37°C and analyzed by ribosome profiling to study the role of ct6A in translation.
Web link https://journals.asm.org/doi/10.1128/spectrum.04255-22
 
Contributor(s) Böttcher B, Kienast SD, Leufken J, Eggers C, Sharma P, Leufken C, Morgner B, Schulz D, Drexler HA, Allert S, Jacobsen ID, Vylkova S, Leidel SA, Brunke S
Citation(s) 38587411
Submission date Mar 25, 2022
Last update date Jul 05, 2024
Contact name Sebastian Andreas Leidel
E-mail(s) sebastian.leidel@unibe.ch
Phone +41 31 631 42 96
Organization name University of Bern
Department Department of Chemistry and Biochemistry
Lab Research group for RNA Biochemistry
Street address Freiestrasse 3
City Bern
State/province Bern
ZIP/Postal code 3012
Country Switzerland
 
Platforms (1)
GPL22403 Illumina NextSeq 500 (Candida albicans)
Samples (12)
GSM5972495 SC5314_HMA1_KO_30_Rep1_RPF
GSM5972496 SC5314_HMA1_KO_30_Rep2_RPF
GSM5972497 SC5314_HMA1_KO_30_Rep3_RPF
Relations
BioProject PRJNA819979

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Supplementary file Size Download File type/resource
GSE199421_CanAlb_HMA1_KO_and_WT_raw_counts.txt.gz 152.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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