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| Status |
Public on Mar 01, 2023 |
| Title |
The RNA seq of cytomatrix and cytosol |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We report separation of the viscous fluid component of the cytoplasm, the cytosol, from the elastic solid, the cytomatrix and describe distinct molecular pathways of each compartment.
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| Overall design |
mRNA profiles of the cytosol (Cyt) and cytomatrix (CMX) at normal growth condition and under the treatment of mTOR-KI, pp242 with 2 replicates for each condition
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| Contributor(s) |
Grimm SL, Coarfa C, Robertson MJ, Kraushaar D, Ricco E |
| Citation(s) |
36824274 |
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| Submission date |
Mar 28, 2022 |
| Last update date |
Mar 01, 2023 |
| Contact name |
Tattym Shaiken |
| E-mail(s) |
tattym3431@att.net
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| Phone |
8326070691
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| Organization name |
Baylor College of Medicine
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| Department |
Medicine
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| Lab |
Gastroenterology
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| Street address |
One Baylor Plaza
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| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (16)
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| Relations |
| BioProject |
PRJNA820634 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE199535_ST.bulk.ribo.RNAseq.STARCount_rename.csv.gz |
1.2 Mb |
(ftp)(http) |
CSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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