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Series GSE200198 Query DataSets for GSE200198
Status Public on Sep 09, 2022
Title A time course of sea anemone development
Organism Nematostella vectensis
Experiment type Expression profiling by high throughput sequencing
Summary A diversity of life cycle stages processed into single-cell RNA-seq libraries in order to characterize cell type diversity and relationships
 
Overall design Embryos/animals were dissociated and cell suspensions were processed with a 10X Genomics Chromium Controller
 
Contributor(s) Cole AG, Technau U, Steger J
Citation(s) 36130520, 39151009
Submission date Apr 05, 2022
Last update date Aug 21, 2024
Contact name Alison G Cole
Organization name University of Vienna
Department Neurosciences and Developmental Biology
Street address Djerassiplatz 1
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (2)
GPL23029 Illumina NextSeq 500 (Nematostella vectensis)
GPL29226 Illumina NovaSeq 6000 (Nematostella vectensis)
Samples (16)
GSM6021899 gastrula18h
GSM6021900 gastrula3
GSM6021901 Gastrula2
Relations
BioProject PRJNA823660

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200198_NVEmodels.gtf.gz 2.8 Mb (ftp)(http) GTF
GSE200198_RAW.tar 141.0 Mb (http)(custom) TAR (of MTX, TSV)
GSE200198_alldata.cells.csv.gz 253.1 Kb (ftp)(http) CSV
GSE200198_alldata.genes.csv.gz 64.4 Kb (ftp)(http) CSV
GSE200198_alldata.mtx.gz 180.8 Mb (ftp)(http) MTX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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