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Series GSE200747 Query DataSets for GSE200747
Status Public on Jun 30, 2023
Title Effects of CDK8/19 mediator kinase inhibition by didehydrocortistatin A (dCA) and 15w on gene expression in HEK293 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-Seq analysis was carried out to investigate the effects of selective CDK8/19 inhibitor didehydrocortistatin A (dCA) and 15w on gene expression in HEK293 cells (293-WT) or the CDK8/19 double-knockout (293-dKO) derivatives.
 
Overall design 293-WT and 293-dKO cells were treated with 0.1% DMSO, 1 μM dCA or 1 μM 15w for 72 hours. Each treatment condition was done in biological triplicate.
 
Contributor(s) Chen M, Ji H, Roninson IB
Citation(s) 37378433
Submission date Apr 13, 2022
Last update date Aug 21, 2023
Contact name HAO JI
E-mail(s) ji5@email.sc.edu
Phone 8037774689
Organization name University of South Carolina
Department College of Pharmacy
Street address 715 SUMTER ST CLS RM 109
City COLUMBIA
State/province SC
ZIP/Postal code 29208
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (18)
GSM6043092 293-WT_Ctrl_72h_Rep1
GSM6043093 293-WT_Ctrl_72h_Rep2
GSM6043094 293-WT_Ctrl_72h_Rep3
This SubSeries is part of SuperSeries:
GSE200754 Transcriptomic and Proteomic Effects of CDK8 and CDK19 Mediator Kinases
Relations
BioProject PRJNA826476

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200747_HEK293_dCA_15w_geneCounts.txt.gz 5.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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