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Series GSE200806 Query DataSets for GSE200806
Status Public on Sep 04, 2023
Title Whole genome transcriptomic analysis of T. onnuriuens NA1 wild-type and MC11 mutant strains on CO
Organism Thermococcus onnurineus NA1
Experiment type Expression profiling by high throughput sequencing
Summary Previously, we reported that the TON_1525 (T55I) (designated as MC11) strain showed superior activity in CO oxidation than the wild-type strain. To understand the in vivo role of TON_1525 in this strain on CO-supplemented medium, transcriptome changes were investigated.
 
Overall design The expression profiles of genes in wild-type and MC11 mutant strains under CO-supplemented conditions were measured.
 
Contributor(s) Lee SH, Lee HS, Kang SG
Citation(s) 37650645
Submission date Apr 14, 2022
Last update date Sep 04, 2023
Contact name LEE SEONG HYUK
E-mail(s) gs360@kiost.ac.kr
Organization name Korea Institute of Ocean Science and Technology
Department Department of Marine Biotechnology
Street address Haeyang-ro
City Busan
ZIP/Postal code 49111
Country South Korea
 
Platforms (1)
GPL19533 Illumina HiSeq 2500 (Thermococcus onnurineus NA1)
Samples (6)
GSM6043945 2019_MM1+CO WT
GSM6043946 2019_MM1+CO MC11
GSM6674605 2022_MM1+CO WT-1
Relations
BioProject PRJNA826843

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200806_2022_WT_and_MC11_CO_processed_data_file.xlsx 499.1 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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