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| Status |
Public on Mar 01, 2010 |
| Title |
Phenotypic plasticity in the pea aphid Acyrthosiphon pisum: miRNA expression |
| Organism |
Acyrthosiphon pisum |
| Experiment type |
Non-coding RNA profiling by array
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| Summary |
We developed high throughput Solexa sequencing and bioinformatic analyses of the genome of the pea aphid Acyrthosiphon pisum in order to identify the first miRNAs from a hemipteran insect. By combining these methods we identified 155 miRNAs including 56 conserved and 99 new miRNAs. Moreover, we investigated the regulation of these miRNAs in different alternative morphs of the pea aphid by analysing the expression of miRNAs across the switch of reproduction mode.
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| Overall design |
An array including the 155 aphid microRNAs was designed in order to follow the expression of aphid microRNAs during the modification of reproduction mode of the pea aphid
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| Contributor(s) |
Jaubert-Possamai S, Tagu D, Legeai F |
| Citation(s) |
20444247 |
| |
| Submission date |
Jan 29, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
Stephanie Jaubert |
| E-mail(s) |
stephanie.jaubert@rennes.inra.fr
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| Organization name |
INRA
|
| Lab |
UMR BiO3P
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| Street address |
domaine de la Motte
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| City |
Rennes |
| ZIP/Postal code |
35653 |
| Country |
France |
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| Platforms (1) |
| GPL9993 |
UMR BiO3P-INRA Acyrthosiphon pisum 0.4K miRNAs v1 |
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| Samples (9)
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| This SubSeries is part of SuperSeries: |
| GSE20110 |
Phenotypic plasticity in the pea aphid Acyrthosiphon pisum |
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| Relations |
| BioProject |
PRJNA129785 |
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