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Series GSE202158 Query DataSets for GSE202158
Status Public on Jun 01, 2023
Title Zfp352 over expression chip-seq result
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Previous study has determined Dux regulates 2CLC trancriptome via binding and activating MERVL,but the mechanism about the change happned during the 2C-exit process are rarely determined.In this study,we try to illustrate how ZFP352 binds genome location to regulate its downstream trancriptome and 2C-exit process.And make some conclusion and hypothesis about ZFP352 co-binding and interact with other trancription factor:Dux,etc to regulate 2C-exit.
 
Overall design Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for ZFP352 protein of input and Zfp352 over expression samples
 
Contributor(s) Liang H, Shen Y, Li Z, Xu H
Citation(s) 37339952, 38228612
Submission date May 03, 2022
Last update date Jan 29, 2024
Contact name zhengyi Li
E-mail(s) 22018026@zju.edu.cn
Phone 18637672616
Organization name Zhejiang University School of Medicine
Department Institute of Genetics
Lab HQ lab
Street address 866 Yuhangtang Rd, Hangzhou
City HangZhou
State/province ZheJiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (2)
GSM6102001 Zfp352OE,input
GSM6102002 Zfp352OE,ZFP352
This SubSeries is part of SuperSeries:
GSE222636 Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
Relations
BioProject PRJNA834815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202158_RAW.tar 410.9 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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