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Series GSE202690 Query DataSets for GSE202690
Status Public on Oct 06, 2023
Title Single cell gene expression analysis of mouse CD45.2+ intraepithelial lymphocyes (IELs) from stomach, small intestine, cecum and colon.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To understand the diversity of IELs in the gastrointestinal tract, CD45.2+ IELs from stomach, small intestine, cecum and colon of C57BL/6 mice were isolated for single cell RNA sequencing.
 
Overall design Single cell RNA sequencing of mouse CD45.2+ IELs from stomach, small intestine, cecum and colon.
 
Contributor(s) Raghu D, Liao Y, Shi W, Mielke L
Citation(s) 37801516
Submission date May 10, 2022
Last update date Oct 07, 2023
Contact name Wei Shi
E-mail(s) Wei.Shi@onjcri.org.au
Organization name Olivia Newton John Cancer Research Institute
Department Bioinformatics and Cancer Genomics
Street address Level 5, ONJ Cancer Centre, 145 Studley Rd
City Heidelberg
State/province VIC
ZIP/Postal code 3084
Country Australia
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM6128525 Cecum-IEL
GSM6128526 Colon-IEL
GSM6128527 Small_Intestine-IEL
This SubSeries is part of SuperSeries:
GSE202692 Colorectal cancer
Relations
BioProject PRJNA836956

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202690_RAW.tar 59.2 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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